[Freesurfer] Colortable

Hi, Is there any way to extend the colortable in freesurfer? Cheers, Eylem Forschungszentrum Juelich

[Freesurfer] Color scale for the probability maps

Hi, When I plot the probability maps, the color scale bar takes negative values too (e.g., setting the threshold min 0 max 0.5, you get a scale bar between -0.5 and +0.5). How can I change the color scale bar so that it shows percentages? Thanks! Eylem

Re: [Freesurfer] Color scale for the probability maps

as the ones we published. You need to copy the label stats to an overlay first though (tools-label-copy label stats to overlay) cheers Bruce On Mon, 8 Jun 2009, Eylem Kirlangic wrote: Hi, When I plot the probability maps, the color scale bar takes negative values too (e.g., setting

Re: [Freesurfer] Color scale for the probability maps

with the new values On Mon, 8 Jun 2009, Eylem Kirlangic wrote: Hi Bruce, That's exactly what I do. The maps do look nice, but the color scale bar does not. It is not a percentage scale, rather it takes a scale of -/+ max value (of course, a negative value does not exist on the probability map

Re: [Freesurfer] Projecting 3-D voxel data onto the corticalsurface-ProbabilityMaps

? For that you will need the subject surfaces, which we are happy to give you. cheers, Bruce On Wed, 27 May 2009, Eylem Kirlangic wrote: If I am to introduce further areas for projection (or construction on the surface), what procedure should I follow? Thanks, Eylem Nick Schmansky wrote: The BA

Re: [Freesurfer] Projecting 3-D voxel data onto the corticalsurface- Probability Maps

functions? Any guidance and all tips are very welcome :-) And sorry for any inconvenience using the terminology! Thanks, Eylem Kirlangic