eesurfer-boun...@nmr.mgh.harvard.edu> on behalf of "Michiko H." <
> michiko...@gmail.com>
> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
> Date: Friday, February 16, 2018 at 3:57 PM
> To: Freesurfer support list <freesurfer@nmr.mgh.harvard.
Hi,
I understand that bbregister can be used to register diffusion to T1 space
but I'm a lot less certain how this can be done in the reverse way, i.e.
registering the entire aparc+aseg file to diffusion B0? Do I also do:
bbregister
--s $subject --mov bo_brain.nii.gz --reg registration2b0.dat
, is there a more efficient way of doing this
rather than having to manually write '--replace 10xx 30xx' repetitively?
Thanks very much again!
M.
On Fri, Feb 9, 2018 at 12:53 PM, Douglas Greve <gr...@nmr.mgh.harvard.edu>
wrote:
>
>
> On 2/6/18 5:26 PM, Michiko H. wrote:
>
> Hi Doug,
&g
sked.nii.gz
>
>
>
>
> On 2/4/18 5:28 PM, Michiko H. wrote:
>
> Hi Freesurfer experts,
>
> I am wondering if it is possible to remove the original labels after
> extending the parcellation by 2mm into the WM for tractography? I don't
> wish to have tractography run on
Hi Freesurfer experts,
I am wondering if it is possible to remove the original labels after
extending the parcellation by 2mm into the WM for tractography? I don't
wish to have tractography run on both sets of labels considering the
algorithm would take into account the streamlines terminating at
Hi Freesurfer Experts,
I was wondering what the best way of combining regions within a
parcellation? For example, in the Schaefer 2017 functional atlas, there are
regions such as:
7Networks_LH_DorsAttn_FEF_1 0 118 22 0
7Networks_LH_DorsAttn_FEF_2 0 119 17 0
