Re: [Freesurfer] ERROR: dimension mismatch between input volume and seg - VolumeROICorticalThickness

Can you send me the input volume and seg at our filedrop? https://gate.nmr.mgh.harvard.edu/filedrop2 On 07/17/2017 06:34 AM, M Janani wrote: > Hi Douglas Greve, > Yes, I’m getting the same result as mentioned below. > Regards, > Janani >

Re: [Freesurfer] ERROR: dimension mismatch between input volume and seg - VolumeROICorticalThickness

Hi Douglas Greve, Yes, I'm getting the same result as mentioned below. Regards, Janani - Did you get

Re: [Freesurfer] ERROR: dimension mismatch between input volume and seg - VolumeROICorticalThickness

Did you get exactly the same error? On 07/14/2017 02:05 AM, M Janani wrote: > > Hi Douglas Greve > , > > Thanks for your support. > > I tried with the --reshape-factor 6. But it didn’t

Re: [Freesurfer] ERROR: dimension mismatch between input volume and seg - VolumeROICorticalThickness

Hi Douglas Greve, Thanks for your support. I tried with the --reshape-factor 6. But it didn't work for me. The segmentation was created using the below mentioned data 1.

Re: [Freesurfer] ERROR: dimension mismatch between input volume and seg - VolumeROICorticalThickness

How did you create the segmentation? You can change the shape of the seg with mri_surf2surf --reshape 6 --s fsaverage --hemi lh --sval seg.mgh --tval seg.reshape.mgh On 7/7/17 10:15 AM, M Janani wrote: Hi Team, I'm attempting to extract cortical thickness values for a region-of-interest

[Freesurfer] ERROR: dimension mismatch between input volume and seg - VolumeROICorticalThickness

Hi Team, I'm attempting to extract cortical thickness values for a region-of-interest (ROI) defined in volume spacesubject for PiB MRI. I got the below mentioned error while computing the stats value cwd cmdline mri_segstats --seg freesurfer/subjects/fsaverage/surf/lh.fsaverage.CBLROI.mgh