Re: [Freesurfer] Most effective way to compute stats/aseg.stats

2020-04-19 Thread Ерохин Александр
External Email - Use Caution In this case, maybe it’s possible to speed up the process a little (without loosing much in accuracy) with some parameter configuration for mri_ca_register ? I’ve checked the help for it. Only some arguments have description, but from the ones the

[Freesurfer] Most effective way to compute stats/aseg.stats

2020-04-19 Thread Ерохин Александр
External Email - Use Caution Hello together,   Could you please suggest the most effective way (in terms of time) for computation of statistics on segmented volumes from .nii source file?   So far I went though the following steps:   recon-all -autorecon1 -no-isrunning -subjid

Re: [Freesurfer] Most effective way to compute stats/aseg.stats

2020-04-19 Thread Bruce Fischl
yes, careg is required. In general you should run things all the way to the end of recon-all as the surfaces are used to improve the accuracy of the aseg. cheers Bruce On Sun, 19 Apr 2020, Ерохин Александр wrote: External Email - Use Caution Hello together,   Could you