On 08/30/2017 03:57 PM, Torrado Carvajal, Angel wrote:
> Hello,
>
> I need to get the segmentation of the occipital cortex. I am
> attempting to generate the corresponding ROI, using the
> mri_annotation2label command and then running mris_anatomical_stats to
> merge the labels and get the
Hello,
I need to get the segmentation of the occipital cortex. I am attempting to
generate the corresponding ROI, using the mri_annotation2label command and then
running mris_anatomical_stats to merge the labels and get the actual volume. I
am calling mri_annotation2label as follows:
Hi Megha
looking at your images it's not clear to me where the gray/white boundary
is. Do you think it should be further out? One thing you can try is (if the
occipital white matter intensity in brain.mgz is 110) putting some control
points in the interior of the white matter. Or as Matt
Higher than 1mm resolution helps a lot. We use 0.7mm isotropic in the HCP.
Peace,
Matt.
From: Megha K. megha...@gmail.com
Date: Monday, December 9, 2013 10:23 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Occipital cortex segmentation
Dear Sir/Madam,
I am using freesurfer
