-boun...@nmr.mgh.harvard.edu
on behalf of Ledesma, Jason
Sent: Monday, March 9, 2020 2:15 PM
To: freesurfer@nmr.mgh.harvard.edu
Subject: [Freesurfer] Tracula Inquiry
External Email - Use Caution
Hi,
I am seeing the following error:
Admins-iMac:XXXneurology$ trac-all -prep -c XXX
External Email - Use Caution
Hi,
I am seeing the following error:
Admins-iMac:XXXneurology$ trac-all -prep -c XXX.24.14Configfile.rtf
Missing }.
Missing }.
}: Command not found.
Missing }.
red255green255blue255: Command not found.
}: Command not found.
Missing }.
}: Command
behalf of Paul Wighton
Sent: Thursday, March 5, 2020 11:29:23 AM
To: Freesurfer support list
Subject: Re: [Freesurfer] Tracula Inquiry
[External Email]
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Hi Jason,
Tracula depends on FSL. If you have FSL installed, all that should be needed
is to define FSL_DIR
External Email - Use Caution
Hi Jason,
Tracula depends on FSL. If you have FSL installed, all that should be
needed is to define FSL_DIR before sourcing
`$FREESURFER_HOME/SetUpFreeSurfer.sh`
So using your example above, you could go
```
export
External Email - Use Caution
Hello,
I am having trouble carrying out Tracula on Freesurfer. See the following
script (for confidentiality, patient's name has been replaced by XXX):
Admins-iMac:~ neurology$ export FREESURFER_HOME=/Applications/freesurfer
Admins-iMac:~
