Re: [Freesurfer] freesufer v6 beta - T2 pial refinement performance and nsigma_below setting

2016-11-30 Thread Matt Glasser
oun...@nmr.mgh.harvard.edu> on behalf of Antonin Skoch <a...@ikem.cz> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Date: Wednesday, November 30, 2016 at 3:31 PM To: <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] freesufer v6 beta - T2 pia

Re: [Freesurfer] freesufer v6 beta - T2 pial refinement performance and nsigma_below setting

2016-11-30 Thread Antonin Skoch
Dear experts, given sub-optimal results of my surfaces I referred to in my previous post, I have tested several different settings and input data preparation to obtain optimal pial surfaces in my modified HCP pipeline. I tested all variants in 5 representative subjects. My modified HCP

Re: [Freesurfer] freesufer v6 beta - T2 pial refinement performance and nsigma_below setting

2016-11-27 Thread Matt Glasser
Skoch <a...@ikem.cz> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Date: Sunday, November 27, 2016 at 7:03 PM To: <freesurfer@nmr.mgh.harvard.edu> Subject: [Freesurfer] freesufer v6 beta - T2 pial refinement performance and nsigma_below setting Dear FreeSurfer ex