Re: [Freesurfer] using both T1/T2 and resolutions

2016-06-10 Thread Alexopoulos, Dimitrios
fer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] using both T1/T2 and resolutions Hi Eugenio, I think he is just after cortical surfaces. Matt. From: <freesurfer-boun...@nmr.mgh.harvard.edu<mailto:freesurfer-boun...@nmr.mgh.harvard.edu>> on behalf of "Iglesias, Eugenio" <e.ig

Re: [Freesurfer] using both T1/T2 and resolutions

2016-06-10 Thread Iglesias, Eugenio
support list <freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>> Date: Friday, June 10, 2016 at 12:30 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>> Subject: Re: [Freesurfer] using both T1/T2 and resolutio

Re: [Freesurfer] using both T1/T2 and resolutions

2016-06-10 Thread Matt Glasser
at 12:30 PM To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Subject: Re: [Freesurfer] using both T1/T2 and resolutions Hi! I actually sent out an email yesterday regarding this. The way that the subfield module is set up, you cannot take advantage of your full res T1 and you

Re: [Freesurfer] using both T1/T2 and resolutions

2016-06-10 Thread Iglesias, Eugenio
reesurfer@nmr.mgh.harvard.edu<mailto:freesurfer@nmr.mgh.harvard.edu>> Subject: [Freesurfer] using both T1/T2 and resolutions Hi, We’d like to process pediatric data through the complete FS 5.3 pipeline. The T1/T2 data are acquired with a 3T Siemens as follows: T1 mpr sag - 0.82x0.82

Re: [Freesurfer] using both T1/T2 and resolutions

2016-06-10 Thread Matt Glasser
oun...@nmr.mgh.harvard.edu> on behalf of "Alexopoulos, Dimitrios" <alexopoulo...@kids.wustl.edu> Reply-To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu> Date: Friday, June 10, 2016 at 10:56 AM To: "freesurfer@nmr.mgh.harvard.edu" <freesurfer@nmr.mgh.harvard.edu

[Freesurfer] using both T1/T2 and resolutions

2016-06-10 Thread Alexopoulos, Dimitrios
Hi, We'd like to process pediatric data through the complete FS 5.3 pipeline. The T1/T2 data are acquired with a 3T Siemens as follows: T1 mpr sag - 0.82x0.82x0.85 T2 Space - 1x1x1 We'd like to process using both the T1 and T2 (for better dura removal and possible myelin analysis). Is it