[Freesurfer] Version Beta 7.0

2020-02-23 Thread Victor Montal Blancafort
External Email - Use Caution Freesurfer developers, I have seen from the download webpage, that there is already a v7.0 beta version. Since we were planing to re-run a lot of individuals 1000+ with Freesurfer6, I was wondering if you could provide timings regarding the release of

[Freesurfer] registrations

2020-02-23 Thread Octavian Lie
External Email - Use Caution Dear All, I need to register: 1. T1.mgz to a T1 postresection volume (no contrast), with large resection. Which one should I use, mri_robust_register, or bbregister, if the latter, which is the better initiator (nmi, spm, fsl)? 2. T1.mgz to a 3D

Re: [Freesurfer] registrations

2020-02-23 Thread Bruce Fischl
Hi Octavian 1. Not sure - you should try them. If you have reasonable surfaces I think bbreg lets you specify masks to ignore, which should be giant help in this scenario. On the other hand, mri_robust_register does this automatically. They are both relatively fast so why not try and see? 2.