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I need to register: 1. T1.mgz to a T1 postresection volume (no contrast), with large resection. Which one should I use, mri_robust_register, or bbregister, if the latter, which is the better initiator (nmi, spm, fsl)? 2. T1.mgz to a 3D FLAIR SPACE sequence (outside of the flair space recon-all flag), which FS registration tool should I use? 3. I then need to mask the coregistered T1 postresection with a T1.mgz mask. I would appreciate commands (either names, or full command lines), please advise. Thank you, Octavian _______________________________________________ Freesurfer mailing list Freesurfer@nmr.mgh.harvard.edu https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer
