Re: [Freesurfer] Wm.mgz editing

2018-02-09 Thread Emily Schwartz
er-boun...@nmr.mgh.harvard.edu] on behalf of Bruce Fischl [fis...@nmr.mgh.harvard.edu] Sent: Thursday, February 08, 2018 11:16 PM To: Freesurfer support list Subject: Re: [Freesurfer] Wm.mgz editing Probably a topological defect but we would need the data to tell. Feel free to ftp it to us and we will

Re: [Freesurfer] Surface Errors

2018-02-21 Thread Emily Schwartz
] Sent: Wednesday, February 21, 2018 2:18 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Surface Errors btw, what verions of FS are you using? On 02/21/2018 01:25 PM, Emily Schwartz wrote: > Got it, thank you so much! > > Best,

Re: [Freesurfer] Surface Errors

2018-02-21 Thread Emily Schwartz
Subject: Re: [Freesurfer] Surface Errors Hi Emily it is a segmentation error, but it's a pretty small one. It will mess up the thickness in a region a few mm^2. You could fix it by editing the wm.mgz if you really care about that spot cheers Bruce On Wed, 21 Feb 2018, Emily Schwartz wrote:

Re: [Freesurfer] Surface Errors

2018-02-21 Thread Emily Schwartz
On 02/21/2018 02:52 PM, Emily Schwartz wrote: > Hi Doug, > > I am using V6.0.0 (x86_64) on Ubuntu. Should I not be getting these errors so > often? > > Best, > > Emily > > From: freesurfer-boun...@nmr.mgh.harvard.edu > [free

Re: [Freesurfer] Surface Errors

2018-02-22 Thread Emily Schwartz
:52 PM To: freesurfer@nmr.mgh.harvard.edu Subject: Re: [Freesurfer] Surface Errors yes, filedrop should be find thanks On 02/21/2018 04:44 PM, Emily Schwartz wrote: > Hi Doug, > > I definitely can. I cannot use FTP from this computer for some reason. Can I > upload it via filedrop

Re: [Freesurfer] Surface Errors

2018-02-22 Thread Emily Schwartz
FreeView (under File->New PointSet) On 02/22/2018 08:48 AM, Emily Schwartz wrote: > Hi Doug, > > Great, thank you. I sent it to you via filedrop. > > Best, > > Emily > > From: freesurfer-boun...@nmr.mgh.harvard.edu > [frees

Re: [Freesurfer] Surface Errors

2018-02-26 Thread Emily Schwartz
o fix it. This might not be fatal as the errors are probably randomly distributed across space. If you have a good number of subjects, then there might not be much of an effect on group maps. On 02/22/2018 02:50 PM, Emily Schwartz wrote: > Hi Doug, > > Attached are the point sets for

[Freesurfer] Hippocampal subfield version

2019-04-03 Thread Emily Schwartz
External Email - Use Caution Hello FS experts, I was planning to use the hippocampal subfield segmentation module in FreeSurfer 6.0 on a Linux ubuntu computer. I also would like to use the nuclei of the amygdala segmentation, but realized I need to download the development vers

Re: [Freesurfer] Hippocampal subfield version

2019-04-11 Thread Emily Schwartz
an Eugenio Iglesias Senior research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com From: on behalf of Emily Schwartz Reply-To: Freesurfer support list Date: Wednesday, 3 April 2019 at 15:44 To: "freesurfer@nmr.mgh.harvard.edu" Subject: [Freesurfer] Hippocam

Re: [Freesurfer] Hippocampal subfield version

2019-04-12 Thread Emily Schwartz
research fellow CMIC (UCL), MGH (HMS) and CSAIL (MIT) http://www.jeiglesias.com From: on behalf of Emily Schwartz Reply-To: Freesurfer support list Date: Thursday, 11 April 2019 at 13:02 To: Freesurfer support list Subject: Re: [Freesurfer] Hippocampal subfield version External Email

[Freesurfer] Research Assistant for Brain Imaging Studies @ Albert Einstein College of Medicine {Disarmed}

2019-05-02 Thread Emily Schwartz
External Email - Use Caution The Position: The Research Assistant will work in the Division of Cognitive and Motor Aging to acquire, manage and process behavioral and brain imaging data in ongoing neuroimaging studies of older adults. Responsibilities • Recruit, screen and