Re: [Freesurfer] Extracting labels using mri_watershed

oun...@nmr.mgh.harvard.edu> on behalf of Fereshte <fereshte.ramez...@gmail.com> Sent: Friday, October 27, 2017 2:40:09 PM To: Freesurfer support list Subject: Re: [Freesurfer] Extracting labels using mri_watershed Hi Dear Emma, Here's the command : "mri_watershed -LABEL 001.mgz out.mgz&quo

Re: [Freesurfer] Extracting labels using mri_watershed

behalf of Fereshte <fereshte.ramez...@gmail.com> Sent: Sunday, October 15, 2017 6:43:08 AM To: Freesurfer support list Subject: Re: [Freesurfer] Extracting labels using mri_watershed Hi Emma, I've tried this before but surprisingly not such labels in the output volume. On Wed, Oct 11, 2017 at

Re: [Freesurfer] Extracting labels using mri_watershed

Hi Emma, I've tried this before but surprisingly not such labels in the output volume. On Wed, Oct 11, 2017 at 9:03 PM Boyd, Emma wrote: > Hi Fereshte, > > mri_watershed -LABEL inputvolume.mgz outputvolume.mgz > > The output volume will contain 6 labels: > 0 = exterior >

Re: [Freesurfer] Extracting labels using mri_watershed

Hi Fereshte, mri_watershed -LABEL inputvolume.mgz outputvolume.mgz The output volume will contain 6 labels: 0 = exterior 1 = scalp 2 = skull 3 = csf 4 = gray 5 = white 6 = fat tissue Emma > On Oct 11, 2017, at 3:38 AM, Fereshte wrote: > > Dear Experts, > How is