Re: [Freesurfer] How to Divide the Brain Surface Parcells to more regions

2019-08-15 Thread Mahshid Fouladivanda
External Email - Use Caution Dear Doug, Special appreciation for your help. Actually, I have created the annotation and the color table files and finally I have divided the parcels. Also, I checked the primary and the division parcels on the .pial surface that they were

Re: [Freesurfer] How to Divide the Brain Surface Parcells to more regions

2019-08-01 Thread Greve, Douglas N.,Ph.D.
You'll have to sample your volume-based segmentation onto the surface using mri_vol2surf (you might have to play with the projection fraction). Then use mris_seg2annot. If you run it with --help, you will get an example. The tricky part is getting the color table set up correctly On 8/1/2019