Hi Atena
the vertex indices are stored in the first column. You should be able to
use them to look up into any overlay you want
cheers
Bruce
On Wed, 6 Mar 2019, Atena Rezaei wrote:
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Hi Bruce,
I am going to extract the cortical parcellation
External Email - Use Caution
Hi Bruce,
I am going to extract the cortical parcellation file with its color table
from freesurfer then import that in the other interface to detect and
visualize the somatosensory (3b broadmann ) area. Therefore, I need the
fifth column with some
Hi Atena
what were you hoping would be in the fifth column? What are you hoping to
create your own annotation files from? Can you give us a bigger picture of
what you are trying to achieve?
cheers
Bruce
On Wed, 6 Mar 2019, Atena Rezaei
wrote:
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Hi Bruce,
Thanks for your comment!
I used mri_annotation2label to existed lh.aparc.annot file in label folder
and got the labels. but the labels' text file contain 0 in fifth column.
I need to create atlas from my own data including surface
Hi Atena
yes, mri_annotation2label should work, although it really depends on what
you want to do next
cheers
Bruce
On Wed, 6 Mar 2019, Atena Rezaei wrote:
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Hello,
I am trying to extract the cortical parcellation(atlas) file from freesurfer
