Hello all,
The new Galaxy wiki includes a Galaxy
Eventshttp://wiki.g2.bx.psu.edu/Eventspage (
http://wiki.g2.bx.psu.edu/Events) that lists upcoming events (such as ISMB/ECCB
2011 http://wiki.g2.bx.psu.edu/Events/ISMB-ECCB-BOSC%202011 and the Workshop
on Comparative
Hi,
I have been looking into re-using the galaxy toolconfig xml files
outside galaxy, for auto-generating wizards for command line tools, in
an own little (eclipse based) software (For a short background, see [1]).
I have come to realize though that the xml-files are not really
independent,
Hello Shaun,
Use the 'from_file' option. The referenced file should be in the ~/tool-data
directory in the Galaxy root. There are several example tools in the
distribution that use this option. Here is the example code from the
annotation profiler tool:
param name=table_names
Dayananda,
The tool data directory should have been created upon running galaxy the first
time. Does galaxy user have write access to this filesystem? The first thing
to check would be to inspect the galaxy directory and see what's actually
there. Does '
Shaun,
Currently, no, though this is an interesting idea. I've created an enhancement
request in bitbucket that you can follow here:
https://bitbucket.org/galaxy/galaxy-central/issue/613/conditional-and-where-tags-multiple
Thanks!
-Dannon
On Jul 5, 2011, at 12:03 PM, SHAUN WEBB wrote:
Hi Shaun,
This should be possible. It's been quite a long time since I worked on tools,
so maybe others can provide better assistance if I am incorrect here. You'll
need to have a conditional something like the following ( not tested whatsoever
):
conditional
First off thank you heartily for pointing me in the right direction here.
It SEEMS like i have managed to accomplish this. Meaning: i finally got the
run to get past the parsing of the config file and now have a process
running on the cpu and the server log shows a command line string that
Hi Greg (again),
This patch adds messages for the purge histories step:
1. A message is printed when processing a new history (so that the user can
tell to which history the following dataset/hda messages belong).
2. in info_only mode, a message is printed about each deleted history
3. in
Hi Hans,
I have created a ticket at BB:
https://bitbucket.org/galaxy/galaxy-central/issue/614/remove-the-select-all-and-unselect-all
Sorry for the late reply.
Thanks,
K
On Sat, May 7, 2011 at 9:02 AM, Hans-Rudolf Hotz h...@fmi.ch wrote:
Hi
Is there a way to remove the Select All and
