Hi everyone,
I want to install my local Galaxy under the Cluster with TORQUE.I have a
question about how they work together successfully.In addition,after my local
Galaxy and TORQUE install successfully,anything else should I do to the Cluster
Galaxy?Thank you very much.
In the spirit of this solution, I've implemented something similar in -central
changeset:
https://bitbucket.org/galaxy/galaxy-central/commits/c7a07f350887fe3b4e822ba6b26b63ac3ac14bdf
The tool now creates temporary files in its working directory, which can be
configured via the
Steve
The GVL project has done it
In template/base.mako template/base/*.mako, add the following, where UA-
= your Google Analytic user account
script type=text/javascript
var _gaq = _gaq || [];
_gaq.push(['_setAccount', 'UA-nn']);
_gaq.push(['_trackPageview']);
(function()
Hi, Ambrose
A couple of places to start:
Did the javascript console (in Firefox: Tools-Web Developer-Web
Console) display any errors when you reloaded the failing saved history
page?
What does is the output of 'hg summary' when run in a terminal from your
Galaxy root directory?
I believe
On Mon, Jul 1, 2013 at 8:34 PM, Brad Chapman chapm...@50mail.com wrote:
This was a typo in the downgrade function for one of the patches. I
pushed a fix so if you update from bitbucket things should work smoothly
again (once we get to problem 2 below).
For anyone with galaxy-dist commit
Hi,
I have just upgraded my galaxy instance.
When trying to access my galaxy instance home page, I get the following
error :
195.221.174.40 - - [02/Jul/2013:15:34:23 +0200] GET / HTTP/1.1 500 - -
Mozilla/5.0 (Windows NT 6.1) AppleWebKit/537.36 (KHTML, like Gecko)
Chrome/27.0.1453.116
Thanks! I did hg pull -u. For the database, I downgraded to 108 and then
upgraded again but got this error when upgrading. Is it due to the Ubuntu
bug? Or something else? Should I be sticking with a particular Hg version
instead of the latest?
$ sh manage_db.sh upgrade
115 - 116...
Tables
Hi,
I am writing a python script that will take in two parameters (an input
file and an ouput file name) , plot a graph and output it to the filename
specified.
PYTHON SCRIPT
#!/usr/bin/python
import sys
import numpy as np
import matplotlib.pyplot as plt
input_file = sys.argv[1]
output_file
HI Vijayalakshmi,
You can take tools/plotting/plotter.py as an example :
See line 81 :
png_out = out_file + '.png' # force it to png
So in your case :
You can force it to pdf :
output_file = sys.argv[2] +.pdf
I think this should work.
Saket
On 2 July 2013 23:37, vijayalakshmi
Actually I didn't notice that I had an error in 114-115 in addition to
115-116 (below).
So actually I just deleted the whole database, checked out a fresh version
with hg, upgraded, upgraded the database with manage_db, and then ran the
add_defaults script for nglims. Everything works and is
When you updated, did you download all the files? Was their any
conflicts during the update? It appears you are missing a file.
Cant locate template for uri 'root/index.mako'
Run 'hg update'...
--
Adam Brenner
Computer Science, Undergraduate Student
Donald Bren School of Information and
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