[galaxy-dev] Installing toolshed repositories with set_environment dependency

2013-10-23 Thread S.D. Hiltemann
I updated my Galaxies to the latest version today, and when I try to install a toolshed repository which defines an environment variable via the set_environment tags in the tool_dependencies.xml file, I get an error (see below). tool_dependencies.xml: ?xml version=1.0? tool_dependency

Re: [galaxy-dev] Installing toolshed repositories with set_environment dependency

2013-10-23 Thread Greg Von Kuster
Hello Saskia, I haven't had a chance to look into this problem, but it's next on my list. If both of the definitions you list worked in the past, then I believe they should still work. It's possible tha t abut was introduced somewhere, and if so, I'll track it down and get it corrected. I

[galaxy-dev] Toolshed reset all repository metadata

2013-10-23 Thread Simon Guest
We've noticed a funny about resetting repository metadata from the toolshed web interface. My understanding is that this is used to get the toolshed back in sync with the underlying mercurial repo, for example after pushing updates from hg on the command line. It seems that only the person who