I should have held onto that email a second longer. Also see the bowtie .loc
files referenced in your tool_data_table_conf.xml, likely in
tool-data/bowtie_indices.loc (and the corresponding .sample) to see that they
match the new format.
-Dannon
On Feb 23, 2011, at 2:38 PM, Dannon Baker wrote
Moving this to the galaxy-dev mailing list since it's about a local Galaxy
installation.
The error here is likely a misconfigured tool_data_table_conf.xml. The format
of this file has changed, see the tool_data_table_conf.xml.sample for an
example of the new structure. Let me know if your fil