Re: [galaxy-dev] macs in galaxy

2011-09-08 Thread Chorny, Ilya
Is there a python script associated with the macs.xml file? From: galaxy-dev-boun...@lists.bx.psu.edu [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Kanwei Li Sent: Wednesday, August 24, 2011 5:41 PM To: KOH Jia Yu Jayce Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] macs

[galaxy-dev] macs in galaxy

2011-08-24 Thread KOH Jia Yu Jayce
In running macs in galaxy, the following error was found ERROR:root:mfold format error! Your input is '32'. It should be like '10,30' A format for mfold like 10,30 is expected... but the default value configured in xml remains as 32. will there be an updated version of this xml in future? Also

Re: [galaxy-dev] macs in galaxy

2011-08-24 Thread Kanwei Li
Hi Jayce, Are you running this on your local instance? It seems you are running MACS 1.4, which our wrapper does not support yet, but we are planning to add a wrapper for 1.4 soon. Thanks, K On Wed, Aug 24, 2011 at 4:20 AM, KOH Jia Yu Jayce ko...@gis.a-star.edu.sgwrote: In running macs in

Re: [galaxy-dev] macs in galaxy

2011-08-24 Thread KOH Jia Yu Jayce
Yes. Thank you for your help :) -Original Message- From: Kanwei Li [mailto:kan...@gmail.com] Sent: Wednesday, August 24, 2011 11:28 PM To: KOH Jia Yu Jayce Cc: galaxy-dev@lists.bx.psu.edu Subject: Re: [galaxy-dev] macs in galaxy Hi Jayce, Are you running this on your local instance