Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-07-23 Thread Luobin Yang
-dev] Sample tracking data transfer hangs in queue forever Message-ID: caohzmpj67udrqbhfchgyxnrxsm3qcy1c7jna1kr0ajbnkek...@mail.gmail.com Content-Type: text/plain; charset=ISO-8859-1 Dear Galaxy Dev, Ok I have gotten further found out what was going on, in my

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-07-13 Thread Greg Von Kuster
yangl...@isu.edu Cc: Galaxy Dev galaxy-...@bx.psu.edu Subject: Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever Message-ID: caohzmpj67udrqbhfchgyxnrxsm3qcy1c7jna1kr0ajbnkek...@mail.gmail.com Content-Type: text/plain; charset=ISO-8859-1 Dear Galaxy

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-07-12 Thread Luobin Yang
for this? Thanks Emily -- Message: 17 Date: Wed, 28 Mar 2012 13:15:47 +0200 From: Leandro Hermida soft...@leandrohermida.com To: Luobin Yang yangl...@isu.edu Cc: Galaxy Dev galaxy-...@bx.psu.edu Subject: Re: [galaxy-dev] Sample tracking data

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-07-11 Thread Greg Von Kuster
To: Luobin Yang yangl...@isu.edu Cc: Galaxy Dev galaxy-...@bx.psu.edu Subject: Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever Message-ID: caohzmpj67udrqbhfchgyxnrxsm3qcy1c7jna1kr0ajbnkek...@mail.gmail.com Content-Type: text/plain; charset=ISO-8859-1

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-07-11 Thread TerAvest, Emily
Subject: Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever Hello Luobin, I'm on my way to ISMB for a week, and then will be at the Galaxy Community Conference the following week, so I won't have time to help you track this problem down until some time in August unless you

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-07-09 Thread Luobin Yang
From: Leandro Hermida soft...@leandrohermida.com To: Luobin Yang yangl...@isu.edu Cc: Galaxy Dev galaxy-...@bx.psu.edu Subject: Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever Message-ID: caohzmpj67udrqbhfchgyxnrxsm3qcy1c7jna1kr0ajbnkek

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-03-30 Thread Greg Von Kuster
Hermida soft...@leandrohermida.com To: Luobin Yang yangl...@isu.edu Cc: Galaxy Dev galaxy-...@bx.psu.edu Subject: Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever Message-ID: caohzmpj67udrqbhfchgyxnrxsm3qcy1c7jna1kr0ajbnkek...@mail.gmail.com Content-Type: text

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-03-28 Thread Leandro Hermida
Dear Galaxy Dev, Now I have another problem with the Galaxy sample tracking data transfer. Galaxy is not able to transfer the datasets but when it attempts to associate the datasets with the library and folder specified in the sequencing request I get this: 2012-03-28 13:07:02,706 -

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-03-28 Thread Leandro Hermida
Dear Galaxy Dev, The malformed library folder error on the latest galaxy-dist I am gettting (shown below) right after data transfer I am pretty sure is a bug and regression. I was just able to do the exact same sample tracking setup on one of my other Galaxy servers which is an older galaxy-dist

Re: [galaxy-dev] Sample tracking data transfer hangs in queue forever

2012-03-26 Thread Luobin Yang
I've got the same problem and when I looked at the data_transfer.log, I saw the following message: 2012-03-01 15:12:27,338 - datatx_13870 - (u'9c17d84742cd2acb63d88b5bd41d968f', u' http://xxx.xxx.xxx.xxx/api/samples/2d9035b3fc152403', {'sample_dataset_ids': ['a799d38679e985db',