Re: [galaxy-dev] Wrapper generator.

2011-05-15 Thread Florent Angly
Hi Jeroen, The idea of having a tool to automatically generate Galaxy wrappers is attractive, and in some cases, possible. For example, I know that the tools in QIIME (http://qiime.sourceforge.net/) use some sort of argument declaration and a Python module to read it and deal with the

Re: [galaxy-dev] Wrapper generator.

2011-05-15 Thread J. F. J. Laros
Dear Florent, On Sun, May 15, 2011 at 09:15:25PM +1000, Florent Angly wrote: Hi Jeroen, The idea of having a tool to automatically generate Galaxy wrappers is attractive, and in some cases, possible. For example, I know that the tools in QIIME (http://qiime.sourceforge.net/) use some sort

[galaxy-dev] Auto file convert

2011-05-15 Thread Ellul Jason
Hi All, I am installing and testing galaxy-dist locally and I have installed all the rgenetics tools and have them working but there seems to be a one problem. If I upload a lped file, then edit the attributes and convert it to a plink pbed file the tools such as QC reports and Case Control