Hi Frederick,
I'm not an expert but maybe you could consider to write a python wrapper to
call your Java application.
---
Marco
On 7 May 2011 08:08, Frederick van Staden cmptrwiz...@gmail.com wrote:
Hello!
Im looking for a way to run jar files(or class files) as a tool.
Im not sure how to
Is there a way i can contribute to the wiki?
Regards
Fred
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Hi Fredrick,
Writing python wraper for this purpose works and JPype should be used for
calling java(class files) from python. Our team at UGA has developed a tool
based on java and python for invoking REST Web services and we invoke the
java class files in python using JPype. The tool has been
There are a growing number of tools based on java packages - perhaps the
example in tools/sr_mapping/srma_wrapper.xml could be a useful 'simple'
starting point?
For more complex scenarios, there are a number of new Picard based java
tools (only exposed on test at present) in the galaxy-central
On Saturday, May 7, 2011, drho...@uark.edu wrote:
Thanks Peter, I debated which to post to.
This is just using the Megablast tool in Galaxy. My IT people are not
Biologists. They had
this working fine and some tweak has screwed up the GI column in the results
file. It should
be the
