[galaxy-dev] Restore Account

2012-07-14 Thread Ming Yu
Hello, My Galaxy account leonyum...@gmail.com has been marked deleted. Would you please restore it for me? Thank you very much. Best, Leon ___ Please keep all replies on the list by using reply all in your mail client. To manage your

Re: [galaxy-dev] Restore Account

2012-07-14 Thread Jennifer Jackson
Hello Leon, The Galaxy Main server is a public resource and we implemented quotas to grant everyone fair access. We found that you had 3 accounts. This exceeds per user account published quotas: http://main.g2.bx.psu.edu/static/terms.html http://wiki.g2.bx.psu.edu/Main We very much

[galaxy-dev] RPy and R installation problems

2012-07-14 Thread Chukhman, Morris
When I try to install rpy-1.0.3 against R-2.11.1 or R-2.15.1 I get the following error about the version number being unobtainable from R --version. python setup.py install --prefix=/path/to/shared/python RHOMES= [] DEBUG= True Setting RHOMES to ['/argus/app/rhel60/R_2.11.1/lib64/R'] Traceback

Re: [galaxy-dev] RPy and R installation problems

2012-07-14 Thread Le-Shin Wu
To build R, you need readline, readline_devel, and gfortran have been installed already. Then, ./configure --enable-R-shlib --prefix=/YOUR_PATH_TO_WHERE_R_WILL_BE_INSTALLED/R make make install To build rpy, you need to first, add R/lib to $LD_LIBRARY_PATH and R/bin to $PATH; sencond, comment

Re: [galaxy-dev] RPy and R installation problems

2012-07-14 Thread Le-Shin Wu
I forgot to mention the most important part. You have to modify line 100 in rpy_tools.py that is under the rpy package as version = re.search( +([0-9]+\.[0-9][0-9]+\.[0-9]+), output) Le-Shin On Jul 14, 2012, at 7:15 PM, Chukhman, Morris wrote: When I try to install rpy-1.0.3 against