Hi all,
I've a bug with the use of workflow. I've created my own workflow and
since the latest update the workflow can be launched correctly but not
completely!!!
The first steps works with outputs on history, a job runs in
job_working_directory for each of these steps. But for my final step :
no
Hello Julie,
This is odd - sorry.
I might be worth uninstalling and re-installing this in the tool
shed admin options - in particular ensure you install tool
dependencies and that this installation process succeeds.
Otherwise - it might be worth trying to put some debug statements
in the
Hello Jens,
A high priority for the team is to replace the tool form with one
that is more javascript driven - right now it repeatedly POSTs to the
web server and has a lot of complicated server state handling. Moving
this client side and doing these things more dynamically should enable
Dear Galaxy team,
I am having a problem running Galaxy/ODoSE. In the step Extract categorize
orthologs, I selected the option Output accessory orthologous genes but it
didn't work and didn't output any file. The stdout contains multiple warnings:
...
WARNING 15:18:06
To close this loop - Ilya Sytchev was experiencing this problem as well
and did a bunch of tests at the recent GCC Hackathon that pretty clearly
demonstrated that this problem occurs when all of the following three
conditions hold - 1) Galaxy targets MySQL 2) MyISAM tables are used and 3)
Galaxy
