[galaxy-dev] picard and package_picard_1_56_0

2014-11-11 Thread Evan Bollig PhD
Devteam: On 10/23 an update was posted to package_picard_1_56_0 that breaks tool Picard. Since 10/23, picard depends on package_picard_1_56_0, which in turn depends on picard 1.122.0, but that dependency makes absolutely no sense. Now when I run PairedReadMateFixer I get: ##

Re: [galaxy-dev] picard and package_picard_1_56_0

2014-11-11 Thread Dave Bouvier
Evan, Thank you for reporting this issue, it has now been corrected. --Dave B. On 11/11/2014 12:56 PM, Evan Bollig PhD wrote: Devteam: On 10/23 an update was posted to package_picard_1_56_0 that breaks tool Picard. Since 10/23, picard depends on package_picard_1_56_0, which in turn

[galaxy-dev] Is release_2014.10.06 official?

2014-11-11 Thread Lance Parsons
I see that the tags release_2014.10.06 and latest_2014.10.06 were created some time ago, but there was never any announcement. Are these considered officially released? Should I upgrade my instance to this version? Most importantly, are there any release notes so I can see what, if

[galaxy-dev] Galaxy Mailing Lists are moving

2014-11-11 Thread Nate Coraor
Hello Galaxy Community, *Galaxy Mailing Lists are moving!* During the week of November 17-21, 2014, Galaxy mailing lists (including this one) will be migrated from lists.bx.psu.edu to lists.galaxyproject.org . This transition should be largely transparent to you, but there are a few things to

Re: [galaxy-dev] picard and package_picard_1_56_0

2014-11-11 Thread Evan Bollig PhD
Thanks Dave, Everything is back to normal again. Cheers, -E -Evan Bollig Research Associate | Application Developer | User Support Consultant Minnesota Supercomputing Institute 599 Walter Library 612 624 1447 e...@msi.umn.edu boll0...@umn.edu On Tue, Nov 11, 2014 at 2:20 PM, Dave Bouvier