Re: [galaxy-dev] trackster is not working on the vrelease_2014.02.10--2--29ce93a13ac7

2014-04-11 Thread Sajoscha Sauer
Hi Liisa, For us, it was only copying the directory “galaxy-dist/static/scripts/packed/viz” from a fresh install to the installation we wanted to update. I hope that helps! Cheers, Sajoscha On Apr 10, 2014, at 5:57 PM, Liisa Koski liisa.ko...@basf.com wrote: Hello, I just updated to

[galaxy-dev] Postgresql database not working

2013-07-01 Thread Sajoscha Sauer
Hi all, I just installed the newest version of Galaxy with: hg clone https://bitbucket.org/galaxy/galaxy-dist I use Apache httpd as proxy and ldap authentication. If I leave the database as it is set by default everything works fine.

Re: [galaxy-dev] History not updating automatically

2013-01-29 Thread Sajoscha Sauer
in detail, since it's not crippling - just annoying. Brad On Jan 28, 2013, at 6:38 AM, Sajoscha Sauer sa...@embl.de wrote: Hi list, I have a weird problem after updating to the latest version. After doing the update as usual, the history panel is not updating automatically

Re: [galaxy-dev] Can't browse big library anymore (web and API)

2013-01-29 Thread Sajoscha Sauer
we have to clean in order to remove the library datasets completely from the database? Thanks a lot, Sajoscha On Jan 29, 2013, at 3:47 PM, Sajoscha Sauer wrote: Dear all, We have a really annoying problem with one of our Libraries: we can't access it anymore. We think the problem

[galaxy-dev] History not updating automatically

2013-01-28 Thread Sajoscha Sauer
Hi list, I have a weird problem after updating to the latest version. After doing the update as usual, the history panel is not updating automatically anymore. And when I press refresh, I get an javascript popup saying: Error getting history updates from the server. Forbidden Also, in

[galaxy-dev] Folder permissions after cluster run

2012-11-19 Thread Sajoscha Sauer
Hi, We are running galaxy on the cluster with the 'real user' submission. It all works fine, but at the end of the run we found something unexpected. All the .dat files in the file_path folder are owned by the user running Galaxy, but all the folders (e.g. dataset_25808_files) are still

Re: [galaxy-dev] Programmatically deleting data sets from data libraries?

2012-09-05 Thread Sajoscha Sauer
Hi Dan, I had a similar problem just yesterday. I couldn't enter the 'Data library' via the API anymore because one of the dataset files wasn't available anymore (or actually it was, but someone had a space in the filename...). So, to be able to enter the 'Data library' again, I had to remove

Re: [galaxy-dev] ValueError: Maximum key size is 448 bits

2012-07-02 Thread Sajoscha Sauer
Ok, found it! The 'id_secret' parameter in the universe_wsgi.ini was just too long. But I think something changed there, because we didn't change the id_secret, and it was working before. Anyway, now it's working! Cheers, Sajoscha On Jun 27, 2012, at 4:09 PM, Sajoscha Sauer wrote: Hi

[galaxy-dev] ValueError: Maximum key size is 448 bits

2012-06-27 Thread Sajoscha Sauer
Hi, I have updated our development installation of Galaxy. This wasn't done for a long time, so it was a quite old version. The update is done from galaxy-central. I did hg pull, hg update and a db update. All that without errors. But when I now try to start Galaxy, I get the following:

Re: [galaxy-dev] Toolshed not accessible

2011-11-30 Thread Sajoscha Sauer
were you attempting to do when you saw this error? Are you still seeing this when you attempt to install a tool from the tool shed? By the way,m I just sent you an email - there are a few more fixes in the latest change set. On Nov 23, 2011, at 11:26 AM, Sajoscha Sauer wrote: Hi Greg