[galaxy-dev] (no subject)

2013-04-04 Thread auguste aurelie
Dear Galaxy manager,

I'm using the GATK beta version on your Galaxy website.
I'm little bit concerned by the fact that i cannot choose my reference
genome, either in the depth of coverage or in the realigner target
creator.
I want to use the Hg19 genome, but i do not know how to load it.

Can you help me please?

Thanks

-- 
*AUGUSTE Aurélie*
Post doctorante

Génétique et génomique du développement gonadique
Université Paris-Diderot/Paris 7
Institut Jacques Monod
CNRS-UMR 7592
555B - Bâtiment Buffon
15 Rue Hélène Brion
Paris Cedex 13
France.
Phone: 0033 1 57 27 81 17
___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:
  http://lists.bx.psu.edu/

To search Galaxy mailing lists use the unified search at:
  http://galaxyproject.org/search/mailinglists/

[galaxy-dev] not enough memory space on my galaxy session

2013-02-20 Thread auguste aurelie
Dear Galaxy manager,

I have a problem,
I'm actually running my RNA seq project on your galaxy on line program.
The matter is I do not have enough space. I'm running 12 times 3 to 4 mega
bit of data.

I have fews options:
1. running my samples in two times... which is quite difficult because they
are all correlate
2. deleted the first files, like the first fastq files, but I'm affraid to
have an error messages
3. to obtain more memory, just for the time of the study.

Thanks a lot for your help

-- 
*AUGUSTE Aurélie*
Post doctorante

Génétique et génomique du développement gonadique
Université Paris-Diderot/Paris 7
Institut Jacques Monod
CNRS-UMR 7592
555B - Bâtiment Buffon
15 Rue Hélène Brion
Paris Cedex 13
France.
Phone: 0033 1 57 27 81 17
___
Please keep all replies on the list by using reply all
in your mail client.  To manage your subscriptions to this
and other Galaxy lists, please use the interface at:

  http://lists.bx.psu.edu/