Has anyone created a tool for running RepeatMasker http://www.repeatmasker.org/
within Galaxy?
It's something we'd like to do so we can create workflows where the fasta is
masked before being searched with blast.
Thanx,
Russell Smithies
New Zealand
Hi Russell,
i have a working wrapper. I will upload it to the toolshed soon, but if
you like to test it before, that would be nice.
kind regards,
Bjoern
Am Montag, den 28.11.2011, 11:57 +1300 schrieb Smithies, Russell:
Has anyone created a tool for running RepeatMasker
, Russell
Cc: 'galaxy-dev@lists.bx.psu.edu'
Subject: Re: [galaxy-dev] tool for RepeatMasker?
Hi Russell,
i have a working wrapper. I will upload it to the toolshed soon, but if you
like
to test it before, that would be nice.
kind regards,
Bjoern
Am Montag, den 28.11.2011, 11:57 +1300
@lists.bx.psu.edu'
Onderwerp: Re: [galaxy-dev] tool for RepeatMasker?
Hi Björn,
I'd be keen to test it before release if that's OK.
I'm surprised there's not one already? I would have thought it was a key tool
in most bioinformaticians toolbox.
Thanx,
Russell Smithies
Infrastructure Team
T 03 489 9085
M 0274
