So I stopped using Apache as a proxy web server and use Galaxy as the web
server directly. This time the status of the sample data transfer changed
to Complete. So I believe Apache needs configuration modifications for
this case, maybe Apache needs mod_dav module and other related modules?
However, when I go to the data library where the datasets are supposed to
go, there is no datasets in it, even though the sample sequence files have
been transferred from the sequencer to the folder specified by
library_import_dir in universe_wsgi.ini. They are just not imported to the
data libraries automatically. When I looked at the data_transfer.log, I
found the following error message:
2012-02-17 09:28:37,927 - datatx_7318 - 400 Bad Request
The server could not comply with the request since
it is either malformed or otherwise incorrect.
Malformed LibraryFolder id ( 994debf9f6ab02b9912262b0bd04c784 ) specified,
unable to decode
2012-02-17 09:28:37,928 - datatx_7318 - Setting status Complete for
dataset All of sample 17
Luobin
On Thu, Feb 16, 2012 at 7:58 PM, Luobin Yang yangl...@isu.edu wrote:
Hi all,
I configured Sample Tracking System in Galaxy to transfer datasets from a
sequencer to data libraries, however, after I selected the datasets to be
transferred on the sequencer and clicked Transfer button, the transfer
status has been in queue forever.
I didn't find any error message in galaxy_listener.log, however, I found
the following error message in data_transfer.log:
2012-02-16 19:39:01,221 - datatx_3623 - Error. !DOCTYPE HTML PUBLIC
-//IETF//DTD HTML 2.0//EN
htmlhead
title405 Method Not Allowed/title
/headbody
h1Method Not Allowed/h1
pThe requested method PUT is not allowed for the URL
/api/samples/1e8ab44153008be8./p
hr
addressApache/2.2.14 (Ubuntu) Server at xxx.xxx.xxx.xxx Port 80/address
/body/html
Any idea what went wrong?
Thanks,
Luobin
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