Re: [galaxy-dev] Different User with Torque

2012-08-06 Thread Oleksandr Moskalenko
On Aug 6, 2012, at 1:01 PM, Wood, James, D james.wo...@topper.wku.edu wrote: I am a systems administrator for a cluster, and we use Torque and Moab as the resource manager and scheduler. I read that you can use drmaa to submit jobs as a different user other than the 'galaxy' user using the

Re: [galaxy-dev] Different User with Torque

2012-08-06 Thread Oleksandr Moskalenko
It looks like the Torque provided libdrmaa.so does not support DRMAA native options. I built a 3rd party library (http://apps.man.poznan.pl/trac/pbs-drmaa/wiki) and was able to successfully run text galaxy jobs under a real user id with a correct resource request specified through the dynamic