[galaxy-dev] Bam to fastq

2011-07-06 Thread Zschunke, Aaron M.
Hi, Is there any way to convert a certain section of a bam file to fastq using the galaxy tools? I just want to convert a certain part of the genome. Thanks. Aaron ___ Please keep all replies on the list by using reply all in your mail

Re: [galaxy-dev] Bam to fastq

2011-07-06 Thread Holger Klein
Hi Aaron, On 07/06/2011 04:45 PM, Zschunke, Aaron M. wrote: Is there any way to convert a certain section of a bam file to fastq using the galaxy tools? I just want to convert a certain part of the genome. Thanks. there is the bam_to_fastq tool on the toolshed