[galaxy-dev] Direct access the fastq files stored in galaxy server local storage
We have a local galaxy server. I know I can get data by ftp, upload directly from browser, or by a URL. If I have some fastq files in the Galaxy server local storage, is it possible to let Galaxy use it directly? Thanks, Fenglou ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Direct access the fastq files stored in galaxy server local storage
I don't think this is possible. Galaxy is designed to import data files and track their relationships and disk usage internally. You can import lots of files at once though.. see: http://wiki.galaxyproject.org/Admin/Data%20Libraries/Uploading%20Library%20Files Brad On Nov 20, 2012, at 3:49 PM, Fenglou Mao feng...@gmail.commailto:feng...@gmail.com wrote: We have a local galaxy server. I know I can get data by ftp, upload directly from browser, or by a URL. If I have some fastq files in the Galaxy server local storage, is it possible to let Galaxy use it directly? Thanks, Fenglou ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Brad Langhorst langho...@neb.commailto:langho...@neb.com ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Direct access the fastq files stored in galaxy server local storage
This is actually possible using data libraries. What you'd want to do is upload by filepath (described in the wiki page Brad linked, heading Upload files from filesystem paths) and check the No box under Copy data into Galaxy. -Dannon On Nov 20, 2012, at 4:13 PM, Langhorst, Brad langho...@neb.com wrote: I don't think this is possible. Galaxy is designed to import data files and track their relationships and disk usage internally. You can import lots of files at once though.. see: http://wiki.galaxyproject.org/Admin/Data%20Libraries/Uploading%20Library%20Files Brad On Nov 20, 2012, at 3:49 PM, Fenglou Mao feng...@gmail.com wrote: We have a local galaxy server. I know I can get data by ftp, upload directly from browser, or by a URL. If I have some fastq files in the Galaxy server local storage, is it possible to let Galaxy use it directly? Thanks, Fenglou ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ -- Brad Langhorst langho...@neb.com ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
