I just noticed the part: files_0|url_paste:
http://jbrowse-server.org/path/to/file.vcf;
JBrowse is fully client-side, so there is no jbrowse server we can use. Is
there a way to pass data to galaxy directly without the server? This
functionality could also be useful for desktop applications.
JBrowse is fully client-side, so there is no jbrowse server we can use. Is
there a way to pass data to galaxy directly without the server? This
functionality could also be useful for desktop applications.
This isn't possible right now, though you could imagine using FTP with the API
to
Passing it back to Jeremy, there is also a Javascript wrapper around the
tools API which might help:
https://bitbucket.org/galaxy/galaxy-central/src/tip/static/scripts/mvc/tools.js
Yes, the Galaxy team is working on a JavaScript binding to the API, and one of
the areas that we've done some
Do the APIs produce the proper CORS headers? Access-Control-Allow-Origin:
*, and responding to OPTIONS requests would be enough. Since this is an
API protected by a key, this doesn't have any real security implications to
just have hard-coded in.
Rob
On Oct 23, 2012 9:59 PM, Brad Chapman
Erik,
The API could be used for this.
Specifically, you could do an upload for the user from a URL via the tools API.
I know that Brad Chapman (cc'd) has done this successfully recently. Brad, can
you share the parameters used to do this?
Thanks,
J.
On Oct 22, 2012, at 3:21 PM, Erik
Erik and Jeremy;
I am a JBrowse Dev hoping to add the ability to export data directly
from JBrowse (JavaScript) to Galaxy
The API could be used for this.
Specifically, you could do an upload for the user from a URL via the
tools API. I know that Brad Chapman (cc'd) has done this
Hello,
I am a JBrowse Dev hoping to add the ability to export data directly from
JBrowse (JavaScript) to Galaxy (without exporting from JBrowse, saving
locally, opening Galaxy, loading file from drive). I have looked through the
wiki page on Data
