Re: [galaxy-dev] Missing tool previews in tool shed, e.g. hmmer.xml

2012-04-03 Thread Peter Cock
On Tue, Apr 3, 2012 at 7:25 PM, Greg Von Kuster g...@bx.psu.edu wrote: Invalid tools are now displayed in the Preview tools and inspect metadata by tool version section - here is the list for the hmmer repository. Lovely - that will help with the existing tools which are not all fully

[galaxy-dev] Missing tool previews in tool shed, e.g. hmmer.xml

2012-03-19 Thread Peter Cock
Hello all, I was looking at Edward's updated HMMER wrapper on the toolshed, http://toolshed.g2.bx.psu.edu/ There is a preview offered for the (simple) hmmpress.xml only, giving the impression that Edward's repository isn't very useful. Why isn't anything shown for the more complex hmmer.xml? If

Re: [galaxy-dev] Missing tool previews in tool shed, e.g. hmmer.xml

2012-03-19 Thread Greg Von Kuster
Hi Peter, Here is the error produced by attempting to load the hmmr.xml tool config into the tool shed. With regard to tool validity, the definition of a valid tool in the tool shed has always been restricted to the tool properly loading in a Galaxy instance. If a tool is not valid, it will

Re: [galaxy-dev] Missing tool previews in tool shed, e.g. hmmer.xml

2012-03-19 Thread Peter Cock
On Mon, Mar 19, 2012 at 1:28 PM, Greg Von Kuster g...@bx.psu.edu wrote: Hi Peter, Here is the error produced by attempting to load the hmmr.xml tool config into the tool shed.  With regard to tool validity, the definition of a valid tool in the tool shed has always been restricted to the tool