[galaxy-dev] Problem with Upload File tool via url
Dear all, My problem is when I use the /Upload File /tool via URL, I get the message The uploaded file contains inappropriate HTML content. I tried a lot of file formats. In our development server this tool works fine but in our public server we have this problem. Do you have any solution? Kind regards, Zinon ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Problem with Upload File tool via url
My hunch is that the source location is probably responding with an error page and not the actual content you're looking for. Is the source URL behind any authentication scheme, and can you verify that from, say, curl or wget that it works and responds with the data? -Dannon On Fri, Mar 1, 2013 at 7:16 AM, Zinonas Antoniou z.anton...@gmail.comwrote: Dear all, My problem is when I use the *Upload File *tool via URL, I get the message The uploaded file contains inappropriate HTML content. I tried a lot of file formats. In our development server this tool works fine but in our public server we have this problem. Do you have any solution? Kind regards, Zinon ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Problem with Upload File tool via url
Danno, thank you for your response. Yes, I tried with both curl and wget. They work and they respond with the data. I tried the same file path in test galaxy server (https://test.g2.bx.psu.edu/) and it's working properly. Thanks, Zinon On 1/3/2013 2:53 ??, Dannon Baker wrote: My hunch is that the source location is probably responding with an error page and not the actual content you're looking for. Is the source URL behind any authentication scheme, and can you verify that from, say, curl or wget that it works and responds with the data? -Dannon On Fri, Mar 1, 2013 at 7:16 AM, Zinonas Antoniou z.anton...@gmail.com mailto:z.anton...@gmail.com wrote: Dear all, My problem is when I use the /Upload File /tool via URL, I get the message The uploaded file contains inappropriate HTML content. I tried a lot of file formats. In our development server this tool works fine but in our public server we have this problem. Do you have any solution? Kind regards, Zinon ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/ ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
Re: [galaxy-dev] Problem with Upload File tool via url
Glad it worked! Looping this back to the -dev list so that the solution is available for others in the future. -Dannon On Fri, Mar 1, 2013 at 9:00 AM, Zinonas Antoniou z.anton...@gmail.comwrote: Dannon, thank you that was the solution!! We copied the path environment variables from our local to our public server and there was an interference. God bless you! I really appreciate your help!! Kind regards, Zinon On 1/3/2013 3:37 μμ, Dannon Baker wrote: Oh, *your* public server! I misread that completely in your first email, sorry. Are you using a proxy on your main server that might be interfering here? On Fri, Mar 1, 2013 at 8:34 AM, Zinonas Antoniou z.anton...@gmail.comwrote: Weird indeed! Yes, I use the full url. It also works fine in our local development server, but in our public server no. Actually the problem is not only with our url source but with any url source. It seems that when we use the Upload File from url we have the same problem. On 1/3/2013 3:31 μμ, Dannon Baker wrote: Weird, this file works fine for me on main.g2.bx.psu.edu using the normal url upload. Are you pasting in the full url including http:// ? ___ Please keep all replies on the list by using reply all in your mail client. To manage your subscriptions to this and other Galaxy lists, please use the interface at: http://lists.bx.psu.edu/
