[galaxy-dev] Question about the repeat tag

2011-12-13 Thread Roger Ngo
Hello all, I have a question on how the repeat tag works in a Galaxy tool XML file. Right now I have a perl script that takes in various arguments. One of the arguments I have is a repeated one which is just a file selection feature. The script works something like this: script.pl $arg1 $arg2

Re: [galaxy-dev] Question about the repeat tag

2011-12-13 Thread Dannon Baker
Roger, The repeat construct creates an array of the various inputs over which you can iterate within the command template of your tool config. See the concatenate datasets wrapper (tools/filters/catWrapper.xml) for a full example, but here are the relevant sections inline: repeat

Re: [galaxy-dev] Question about the repeat tag

2011-12-13 Thread Roger Ngo
Thanks Dannon! This was exactly what I was looking for! On Tue, Dec 13, 2011 at 7:29 PM, Dannon Baker dannonba...@me.com wrote: Roger, The repeat construct creates an array of the various inputs over which you can iterate within the command template of your tool config. See the concatenate