Re: [galaxy-dev] Question on storage configuration for Galaxy datasets

2014-02-28 Thread Lukasse, Pieter
Hi all,

Could someone comment on my question below ? I see that a similar question from 
Eric (with title object_store_conf.xml route users to different storage ) is 
also unanswered.

Thanks for your help,

Pieter.

From: galaxy-dev-boun...@lists.bx.psu.edu 
[mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Lukasse, Pieter
Sent: donderdag 30 januari 2014 11:10
To: galaxy-dev@lists.bx.psu.edu
Subject: [galaxy-dev] Question on storage configuration for Galaxy datasets

Hi ,

We would the location of the datasets our Galaxy stores to be determined 
dynamically based on a set of rules. For example: for a specific role we would 
like a datasets to be stored in a folder /storage/no_backup and for another 
role this should be /storage/with_backup

Is there currently a configuration file in Galaxy to set this up? Or perhaps 
any alternative solutions?

Thanks and regards,

Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB,
Wageningen, the Netherlands
+31-317481122; skype: pieter.lukasse.wur
http://www.pri.wur.nlhttp://www.pri.wur.nl/

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Re: [galaxy-dev] Question on storage configuration for Galaxy datasets

2014-02-28 Thread John Chilton
An answer may not be forthcoming because it is easier to say something
is possible then to say it is impossible. I will risk embarrassment
however and say there is not a configuration file in Galaxy to support
this, there is not an alternative solution at this time that I am
aware of. I really don't know how tough this would be to implement - I
imagine object store to use gets picked at a different place from
where permissions are accessed/assigned and roles can change over the
lifetime of a dataset but I don't think there is infrastructure right
now to support moving datasets from one object store to another.

If you wanted to hack on this I would start by looking at the object
store code: 
https://bitbucket.org/galaxy/galaxy-central/src/6a633b37c4c47bba640d05fef72fd73f41ae5086/lib/galaxy/objectstore/__init__.py?at=default.

Hope this helps.

-John

On Fri, Feb 28, 2014 at 3:30 AM, Lukasse, Pieter pieter.luka...@wur.nl wrote:
 Hi all,



 Could someone comment on my question below ? I see that a similar question
 from Eric (with title object_store_conf.xml route users to different
 storage ) is also unanswered.



 Thanks for your help,



 Pieter.



 From: galaxy-dev-boun...@lists.bx.psu.edu
 [mailto:galaxy-dev-boun...@lists.bx.psu.edu] On Behalf Of Lukasse, Pieter
 Sent: donderdag 30 januari 2014 11:10
 To: galaxy-dev@lists.bx.psu.edu
 Subject: [galaxy-dev] Question on storage configuration for Galaxy datasets



 Hi ,



 We would the location of the datasets our Galaxy stores to be determined
 dynamically based on a set of rules. For example: for a specific role we
 would like a datasets to be stored in a folder /storage/no_backup and for
 another role this should be /storage/with_backup



 Is there currently a configuration file in Galaxy to set this up? Or perhaps
 any alternative solutions?



 Thanks and regards,



 Pieter Lukasse

 Wageningen UR, Plant Research International

 Departments of Bioscience and Bioinformatics

 Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB,
 Wageningen, the Netherlands

 +31-317481122; skype: pieter.lukasse.wur

 http://www.pri.wur.nl




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[galaxy-dev] Question on storage configuration for Galaxy datasets

2014-01-30 Thread Lukasse, Pieter
Hi ,

We would the location of the datasets our Galaxy stores to be determined 
dynamically based on a set of rules. For example: for a specific role we would 
like a datasets to be stored in a folder /storage/no_backup and for another 
role this should be /storage/with_backup

Is there currently a configuration file in Galaxy to set this up? Or perhaps 
any alternative solutions?

Thanks and regards,

Pieter Lukasse
Wageningen UR, Plant Research International
Departments of Bioscience and Bioinformatics
Wageningen Campus, Building 107, Droevendaalsesteeg 1, 6708 PB,
Wageningen, the Netherlands
+31-317481122; skype: pieter.lukasse.wur
http://www.pri.wur.nlhttp://www.pri.wur.nl/

___
Please keep all replies on the list by using reply all
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  http://lists.bx.psu.edu/

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