Re: [galaxy-dev] Teaching using Galaxy

2013-04-30 Thread Sytchev, Ilya
Hi David, These short courses may be of interest: http://scriptogr.am/ohofmann/intro-to-galaxy http://scriptogr.am/ohofmann/rna-seq http://scriptogr.am/ohofmann/exome-seq Ilya On 4/25/13 10:11 AM, David Joly idj...@gmail.com wrote: I was pretty much interested in Bio-Linux. However, the

Re: [galaxy-dev] Teaching using Galaxy

2013-04-25 Thread Hans-Rudolf Hotz
Hi David I have not used or tested it myself yet, but: have you looked into Bio-Linux ? The latest release (Bio-Linux 7) comes with Galaxy pre-installed, see: http://nebc.nerc.ac.uk/tools/bio-linux/bio-linux-7-info Regards, Hans-Rudolf On 04/25/2013 12:52 AM, David Joly wrote: Thanks

Re: [galaxy-dev] Teaching using Galaxy

2013-04-24 Thread Dave Clements
Hi David, Using Galaxy to teach undergraduates is a long term interest of mine. Which, unfortunately, does not mean I have yet put a lot of thought into it. However, lack of thought hasn't stopped me yet. First, this topic was discussed in a breakout at last year's GCC:

Re: [galaxy-dev] Teaching using Galaxy

2013-04-24 Thread Dave Clements
Hi David, Galaxy does sound like a great match for this course. It could also play a (smaller) part in the other course you are considering. Part of the course could include installing Galaxy and wrapping other tools to put into it. We are a Python based framework I do strongly recommend you

[galaxy-dev] Teaching using Galaxy

2013-04-22 Thread David Joly
Hi everybody! I am currently creating a bioinformatics course for undergraduate (biology students with no knowledge of programming). I would like to use Galaxy as their everyday platform where they would learn the basics and use the appropriate tools (BLAST and databases, multiple alignment,