Re: [galaxy-dev] Change in toolshed disallowing install of previous versions of tools?

2015-08-21 Thread Martin Čech
Hi Aaron, I am just following up with a note that this has been fully resolved. Please let us know if you find any more problems. Thank you for using Galaxy. Martin On Wed, Aug 12, 2015 at 7:21 PM Aaron Petkau aaron.pet...@gmail.com wrote: Heh, always something that's discovered after the

Re: [galaxy-dev] Automated training environments - was Re: 20 August GalaxyAdmins Meetup: Genomic Data

2015-08-21 Thread Bjoern Gruening
Hi Mark, Thanks Bjorn, Have already pulled a few of your Docker containers (And have been learning an awful lot from your Github code the BioBlend source) Glad to see this is useful for the community. Will try and get further with this later (My Docker machine is being restored from

Re: [galaxy-dev] Change in toolshed disallowing install of previous versions of tools?

2015-08-21 Thread Aaron Petkau
Hello Martin, Yep, this is fully resolved for me. Thanks for following up, and for all the hard work you and the rest of the team do. Aaron On Fri, Aug 21, 2015 at 9:55 AM, Martin Čech mar...@bx.psu.edu wrote: Hi Aaron, I am just following up with a note that this has been fully resolved.

Re: [galaxy-dev] Get dataset/API ids for a dataset

2015-08-21 Thread Asma Riyaz
Hi Carl, The visualization comes into play after a lab implemented tool in galaxy is ran; I am not using galaxy's workflow. Is tracing back ids still possible in this case with the test case you wrote earlier? Also I couldn't figure out what trans refers to in your previous message. Thank you,

Re: [galaxy-dev] API for job and workflow input metadata

2015-08-21 Thread Eric Rasche
Hi Marco, You're looking for the tool build and show routes. Galaxy API: http://galaxy.readthedocs.org/en/master/api_doc.html#galaxy.webapps.galaxy.api.tools.ToolsController.build http://galaxy.readthedocs.org/en/master/api_doc.html#galaxy.webapps.galaxy.api.tools.ToolsController.show BioBlend: