Hello Galaxy devs,
I’m developing a tool that uses a multi-select list to accept any number of
input datasets. The tool works fine when executing it within Galaxy, but when
running it through planemo testing, it never passes, so I’m wondering if there
are known issues with planemo testing
Hi Greg,
in the inputs the param has name "input_gff", while in the test you are using
name "input".
Cheers,
Nicola
Von Kuster, Greg ha scritto
>Hello Galaxy devs,
>
>I’m developing a tool that uses a multi-select list to accept any number of
>input datasets. The tool works fine
Hello gents,
I just installed "FASTQ Groomer tool" for the teachers to try it out and I've
been getting the following error than I do not understand:
galaxy.jobs DEBUG 2015-11-04 08:16:19,957 (756) Working directory for job is:
/home/galaxy/galaxy-prod/database/job_working_directory/000/756
Hi Floreline,
Did you use several workers and/or handler ? I have had the same issue on
Galaxy instances from our cloud, and a "not beautiful manner" I found to
succeed authenticate was to clic several times on the galaxy name (top left of
your instance) to force reload the page before
Update :
When I clic several time on the galaxy name, I got this on the log :
Exception happened during processing of request from ('127.0.0.1', 45055)
Traceback (most recent call last):
File
path/to/galaxy-master/eggs/Paste-1.7.5.1-py2.6.egg/paste/httpserver.py",
line 1068, in
I am not very good with Apache rewrite rules, but I think there is a problem
with (at least) the first rule. I see in the Apache documentation [1] that the
following “doesn’t make sense, not supported":
^/somepath(.*) http://thishost/otherpath$1 [P]
The [P] flag is for forwarding to a proxy,
Hi Aaron,
we touched this recently here:
https://github.com/galaxyproject/tools-devteam/pull/267
I believe that if you specify the repository_dependencies.xml of your suite
in the following way:
http://toolshed.g2.bx.psu.edu; />
you will pin the exact revision of the tool
Thanks Peter, Nicola,
Ok, I'll try to switch on an 64bits computer then, maybe there's some other
errors due to this.
Thanks a lot.
Olivier
-Message d'origine-
De : Peter Cock [mailto:p.j.a.c...@googlemail.com]
Envoyé : mardi 3 novembre 2015 19:24
À : o.cla...@outlook.fr
Cc : Nicola
So yeah you might be on to something here. When I commented the Rewrite rules I
could access my galaxy instance from myservername:8081 with or without the
index.html file placed in /var/www/html. When I did place it in the directory
though and I tried with the rewrite rules my server gave me
