[galaxy-dev] It 's possible to purge deleted datasets with last galaxy code ?

2016-05-23 Thread Sarah Maman
Hello, I have a local instance of Galaxy with the latest code version. In 2015's code, it was possible to purge deleted datasets. With the lastest code, in history menu, we do not find the possibility to purge deleted datasets. Could you please explain us how to purge dataset and not only hidde

[galaxy-dev] [rchelp.rc.fas.harvard.edu #101266] Re: Refresh of screens in Galaxy Docker environment

2016-05-23 Thread Nate St. Germain via RT
All, Just catching up from the thread over the weekend. I put together the galaxy container for the Huttenhower lab and have been working with George. The image is built from bgruening/galaxy-stable:dev. See the repo here: https://github.com/fasrc/fasrc-galaxy We're currently running the

Re: [galaxy-dev] Current history via the REST API (or blend4j)

2016-05-23 Thread Carl Eberhard
There's a way to get the current history data through a non-api url: /history/current_history_json ...but, I don't believe those are accessible through any of the bio/blend libraries. Failing the above, is there some way to get the history ID from the UI? You can click the information button

Re: [galaxy-dev] Refresh of screens in Galaxy Docker environment

2016-05-23 Thread John Chilton
It is probably worth looking at this Galaxy issue - this may have little to do with Docker or the Docker server might have a different time configured than a local one? History updating is broken for many clients in 16.04 and I am unsure if this intention is to fix it or not.

[galaxy-dev] Galaxy Interactive Environments: node 0.10.X - 0.11.X vintage necessary?

2016-05-23 Thread Tamir,Ido
Hi, are the GIE still tied to an outdated node version? http://galaxy.readthedocs.io/en/master/admin/interactive_environments.html says: 0.10.X - 0.11.X vintage (https://github.com/erasche/galaxy/blob/gie-docs/doc/source/admin/interactive_environments.rst) but also: "We’re working on solutions