Re: [galaxy-dev] regarding tool dependencies

Hello Nir, the tool publishing process looks like this: tools for Galaxy are contributed by developers like you to the Tool Shed https://toolshed.g2.bx.psu.edu/ which serves as an 'appstore' for Galaxies worldwide. Any Galaxy administrator can then instal the tool. Some tools have dependencies,

[galaxy-dev] regarding tool dependencies

Dear Galaxy-dev team, As a research scientist in the dept. of Plant Sciences I would like to contribute a tool to the 'Metabolomics' tool-box under Galaxy. The tool is principally written in R, with some dependencies (namely: R>=3.x, and several R packages). Following the documentation in:

[galaxy-dev] Newline characters for txt files

I have observed that when I upload a file with CRLF line endings into Galaxy and then later download it, the endings have changed to UNIX (LF only). I also observed that an uploaded file containing CR only line endings in Galaxy downloads to a file again with LF only line endings. These file

Re: [galaxy-dev] Configuring Galaxy, Pulsar and Conda

Hi John, thank you for your help. Now it works! Il 07/02/2017 21:20, John Chilton ha scritto: Hello, Thanks for working on this - Pulsar still hasn't quite caught up with Galaxy in terms of support for Conda but we are getting there. So I noticed two things that should help today when I was

Re: [galaxy-dev] Create a new datatype svg

Hmm. I wonder if a composite datatype would work here? https://wiki.galaxyproject.org/Admin/Datatypes/Composite%20Datatypes Peter On Thu, Feb 9, 2017 at 9:25 AM, Jochen Bick wrote: > Hi Dan, > > I understand the option with this specific flag. What I mean is that for

Re: [galaxy-dev] Create a new datatype svg

Hi Dan, I understand the option with this specific flag. What I mean is that for example the file format bam has two file in one save button. So if you click on save you can either save the bam file or the bai file. I would liek to have the same feature with my png and svg. So that I have just