Re: [galaxy-dev] Difficulty uploading BAM files

Hi Peter, Thanks to you and all the other responders who were so helpful! This did solve my problem right away. Best regards, Scott On Fri, Feb 26, 2016 at 3:13 PM, Peter Cock wrote: > Hi Scott, > > Galaxy itself requires samtools (to deal with BAM files),

Re: [galaxy-dev] Difficulty uploading BAM files

, February 26, 2016 6:01 PM To: Scott Szakonyi Cc: Galaxy Dev Mailing List Subject: Re: [galaxy-dev] Difficulty uploading BAM files Hello Scott, you do need a samtools binary on GALAXY's PATH. This is not samtools installed from the toolshed. Best, Marius On 26 February 2016 at 18:49, Scott Szakonyi

Re: [galaxy-dev] Difficulty uploading BAM files

To: Galaxy Dev Mailing List Subject: [galaxy-dev] Difficulty uploading BAM files Hi, I'm having trouble uploading BAM files in our development environment. Other files types are uploading without issue. I'm testing with a small BAM file I downloaded, and I'm able to successfully upload it on our

Re: [galaxy-dev] Difficulty uploading BAM files

Hello Scott, you do need a samtools binary on GALAXY's PATH. This is not samtools installed from the toolshed. Best, Marius On 26 February 2016 at 18:49, Scott Szakonyi wrote: > Hi, > > I'm having trouble uploading BAM files in our development environment. > Other