Re: [galaxy-dev] Running Galaxy on a cluster with SLURM ?

2015-09-23 Thread Sven E. Templer
Hi Carlos, next steps might include: * install slurm drmaa http://apps.man.poznan.pl/trac/slurm-drmaa e.g. curl -#o slurm-drmaa-1.0.7.tar.gz http://apps.man.poznan.pl/trac/slurm-drmaa/downloads/9 tar -xf slurm-drmaa-1.0.7.tar.gz cd slurm-drmaa-1.0.7 p=$(which srun)

[galaxy-dev] Running Galaxy on a cluster with SLURM ?

2015-09-21 Thread Carlos Lijeron
Hello everyone, I¹m setting up Galaxy to run on our cluster which uses SLURM as the job manager. I am wondering if any of you have any expertise in this area, ideas to share or lessons learned. I carried out the following steps listed below, but I can¹t make the final connection just yet.