Re: [galaxy-dev] unipept visualization

2017-09-01 Thread Nicola Soranzo
Hi Matthias, the fix is available only on dev at the moment. Please check that if you have a config/datatypes_conf.xml file, this will take precedence over config/datatypes_conf.xml.sample (where the fix was applied), so you may need to merge the changes to config/datatypes_conf.xml (or remove

Re: [galaxy-dev] unipept visualization

2017-08-31 Thread Nicola Soranzo
Hi Matthias, that should be fixed on dev already by pull request: https://github.com/galaxyproject/galaxy/pull/4522 Cheers, Nicola On 31/08/17 16:30, Matthias Bernt wrote: Hi Sam, I tried on 17.05 and dev without any success. Any idea where I could start debugging? Best, Matthias On

Re: [galaxy-dev] unipept visualization

2017-08-31 Thread Matthias Bernt
Hi Sam, I tried on 17.05 and dev without any success. Any idea where I could start debugging? Best, Matthias On 30.08.2017 18:23, Aysam Guerler wrote: Hey Matthias, I noticed that this visualization has already been added and should be working in release 17.05 and a d3_hierarchy file. Its

Re: [galaxy-dev] unipept visualization

2017-08-28 Thread Matthias Bernt
Hi Sam, thanks for the answer. So far I have not configured anything, I was hoping that it works out of the box :). Could you point me to some documentation where the setup is explained? Best, Matthias On 25.08.2017 19:05, Aysam Guerler wrote: Hi Matthias, Have you added the visulization

[galaxy-dev] unipept visualization

2017-08-25 Thread Matthias Bernt
Dear list, I can not get the wonderful unipept visualization to work on our Galaxy instance (a test instance on the dev branch). I get the message: "Unfortunately we could not identify a suitable plugin" The file I try to visualize was generated by unipept (pept2lca) and is of format