Re: [galaxy-dev] Improved DRMAAJobRunner (Peter van Heusden)

2017-07-10 Thread Peter van Heusden
; >>> > >>> > >>> The tool produces an additional output on the bug report – > >>> > >>> > >>> ustacks parameters selected: > >>> > >>> Sample ID: 1 > >>> > >>>Min depth of coverage to

Re: [galaxy-dev] Improved DRMAAJobRunner (Peter van Heusden)

2017-07-10 Thread Matthias Bernt
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Re: [galaxy-dev] Improved DRMAAJobRunner (Peter van Heusden)

2017-07-10 Thread Matthias Bernt
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Re: [galaxy-dev] Improved DRMAAJobRunner (Peter van Heusden)

2017-07-08 Thread Peter van Heusden
On Sat, 8 Jul 2017 at 11:56 Matthias Bernt wrote: > Hi Peter, > > > Code looks interesting. This is for Univa Grid Engine? > > In its current state its tailored for the Univa Grid Engine. But the drmaa > library code that is based on job_info() and wait() should run on all grid >

Re: [galaxy-dev] Improved DRMAAJobRunner (Peter van Heusden)

2017-07-08 Thread Matthias Bernt
Hi Peter, > Code looks interesting. This is for Univa Grid Engine? In its current state its tailored for the Univa Grid Engine. But the drmaa library code that is based on job_info() and wait() should run on all grid engines. For the command line based code changes might be necessary for the