Re: [galaxy-dev] wrong validation message in toolshed

2015-03-23 Thread Lukasse, Pieter
: donderdag 19 maart 2015 17:39 To: 'Martin Čech'; galaxy-dev@lists.galaxyproject.org Subject: Re: [galaxy-dev] wrong validation message in toolshed Hi Martin, Thanks. I fixed the problems in the .xml files, now referring to “../match_library.py” . Now the error I get when I try to reset the repository

[galaxy-dev] wrong validation message in toolshed

2015-03-19 Thread Lukasse, Pieter
Hi , I'm getting this error message, which is not correct since the file IS available in the repository. Metadata may have been defined for some items in revision 'f70b775dcaa5'. Correct the following problems if necessary and reset metadata. create_model.xml - This file refers to a missing

Re: [galaxy-dev] wrong validation message in toolshed

2015-03-19 Thread Martin Čech
Hi Pieter, there seems to be either multiple incorrect links to the file or the wrappers expect multiple files that are missing from the repo. E.g. your wrapper library_lookup.xml refers to a file /GCMS/match_library.py which does not exist. (on this line: code file=match_library.py /) After you

Re: [galaxy-dev] wrong validation message in toolshed

2015-03-19 Thread Lukasse, Pieter
...@bx.psu.edu] Sent: donderdag 19 maart 2015 15:02 To: Lukasse, Pieter; galaxy-dev@lists.galaxyproject.org Subject: Re: [galaxy-dev] wrong validation message in toolshed Hi Pieter, there seems to be either multiple incorrect links to the file or the wrappers expect multiple files that are missing from