Hi all,
While I was checking Galaxy's database folder, I noticed that some of the
files there did not end in .dat. For example, I had dataset_150.dat.bam,
dataset_194.dat.fai and dataset_442_files. Can they be removed via the
delete and purge scripts of Galaxy?
Cheers,
CL
Hi,
Thanks for your answer.
Effectively it's not necessary on integrating Galaxy with a third party
authentication system.
I've integrated my configuration to the file default and it's work !
Just one remark. I've configured the file ports.conf with the line :
Listen 8080, and it didn't work!
In
Hello,
I recently launched a new instance about 6 minutes ago using BioCloud
Central (https://biocloudcentral.herokuapp.com/launch) but did not receive
a Public IP address. I'm not sure if the instance was fully launched.
Here is the Instance and Image ID I received:
Instance ID
i-6789fa01
Hi,
I've follow the instruction of this wiki :
http://wiki.g2.bx.psu.edu/Admin/Config/Performance/Web%20Application%20Scaling
And when I ran the command :
GALAXY_RUN_ALL=1 sh run.sh --daemon
I've just obtain this answer in the terminal :
Entering daemon mode
without this type of line :
Hi,
I decided to format my PC and reinstall everything. I have Ubuntu
12.04LTS installed in one 1TB hard drive (/ and swap) and the /home folder
installed in a 3TB hard drive. I created a /tmp partition of 110GB and a
/tmp partion of 110GB, both in the 1TB HD. Then I mounted /tmp as /tmpfs
Hi,
Actually Galaxy is using tmpfs mounted on /tmp. I just uploaded a small
file and a big file. The small file works fine, but the big file (~20GB)
did not. The tmpfs started getting used and stopped at 2.2GB, then I got a
error from Galaxy.
Here is the df -h:
Filesystem Size Used Avail
Hi Luciano,
Just curious, but could you post the /tmp and swap lines from your fstab? I
think I see your problem, but I'm not certain. Thanks!
Jim Redmond
Department of Developmental Biology
Washington University in St. Louis
Office: +1-314-747-4033
jredm...@wustl.edu
From:
Hi Madeleine,
By design (ie, for your own benefit), there is no way for anyone but
yourself to check on the status of an AWS instance once started. In order
to check what happened and if an instance got started, you should log into
https://console.aws.amazon.com/ec2/home with the same AWS