[galaxy-dev] Blast+ Wrapper: blastdbcmd: range parameter

2014-10-21 Thread Matthias Enders
Hello all, I use the ToolShed NCBI Blast+ Wrappers (https://toolshed.g2.bx.psu.edu/repository?repository_id=1d92ebdf7e8d466c) and I tried to retrieve sequence information from databases. The blastdbcmd comes with the feature to extract a given range of the sequence: -Range string Range of se

[galaxy-dev] Uploading workflow to toolshed

2014-10-21 Thread Mikel Egaña Aranguren
Hi; We are developing a Metagenomics tool suite (along the lines of Mothur) and we would like to include some example workflows. What is the best practice to upload workflows to the tool shed? - As part of the tool suite. - In a separate repository with only the workflows. Thanks -- Mikel Egañ

Re: [galaxy-dev] Uploading workflow to toolshed

2014-10-21 Thread Björn Grüning
Hi! Am 21.10.2014 um 12:39 schrieb Mikel Egaña Aranguren: > Hi; > > We are developing a Metagenomics tool suite (along the lines of Mothur) and > we would like to include some example workflows. What is the best practice > to upload workflows to the tool shed? > > - As part of the tool suite. >

Re: [galaxy-dev] Uploading workflow to toolshed

2014-10-21 Thread Björn Grüning
Hi! Am 21.10.2014 um 12:39 schrieb Mikel Egaña Aranguren: > Hi; > > We are developing a Metagenomics tool suite (along the lines of Mothur) and > we would like to include some example workflows. What is the best practice > to upload workflows to the tool shed? > > - As part of the tool suite. >

Re: [galaxy-dev] Blast+ Wrapper: blastdbcmd: range parameter

2014-10-21 Thread Peter Cock
Hi Matthias, Can you file an issue here about adding this here please? https://github.com/peterjc/galaxy_blast Thanks! Peter On Tue, Oct 21, 2014 at 10:36 AM, Matthias Enders wrote: > Hello all, > > I use the ToolShed NCBI Blast+ Wrappers > (https://toolshed.g2.bx.psu.edu/repository?repositor