[galaxy-dev] docs for data_source.py, file type handling, etc.

2013-06-15 Thread Brian Craft
I'm trying to add a data source that provides tarballs. Are there any docs for data_source.py, the data types registry, and so-forth? The data source docs seem to only cover the http callback mechanism. I'm trying to understand what happens after that: a json file is created with download params, d

[galaxy-dev] wiki surge protection broken

2013-06-15 Thread Brian Craft
Followed a google result to the wiki, and got a "surge protection" warning: http://wiki.galaxyproject.org/Admin/Tools/ToolConfigSyntax Unless you're protecting from "surges" of 0.5 - 1 pages per hour, your surge protection is broken. ___ Ple

[galaxy-dev] invalid frame access with data source

2013-06-17 Thread Brian Craft
When loading a data source in an iframe, the galaxy js is doing some sort of invalid probing of the frame, leading to this error: Blocked a frame with origin "http://pk:8080"; from accessing a frame with origin "https://tcga1.kilokluster.ucsc.edu";. pk:8080 is the galaxy frame. Here is the offen